# define scoring mesh
#

###### Generation of primary field
#### Generate gamma deriving from radioactive decay

# Scoring mesh is used to calculate
#  the dose deposition in the phantom
#the voxels are 2 mm wide.

/score/create/cylinderMesh boxMesh_1
#
/score/mesh/cylinderSize 3.25 7.5 cm
/score/mesh/translate/xyz 0.1 0.1 0.0 cm
/score/mesh/nBin 17 37 37
#
/score/quantity/doseDeposit dose
#
/score/close
#
#/vis/disable
#
#===========================================
/score/create/boxMesh boxMesh_2
#
/score/mesh/boxSize 0.5 0.5 0.5 cm
/score/mesh/translate/xyz 0 1.0 0 cm
/score/mesh/nBin 5 5 5
#
/score/quantity/doseDeposit dose
#
/score/close 
#
#/vis/disable
#

#==============================================
/score/create/cylinderMesh boxMesh_3

/score/mesh/cylinderSize 2 5 cm 
/score/mesh/translate/xyz 0 6.0 0 cm
/score/mesh/nBin 10 25 25

/score/quantity/doseDeposit dose
#
/score/close 
#
#/vis/disable
#
#=============================================
/score/create/cylinderMesh  boxMesh_4

/score/mesh/cylinderSize 3.175 10  cm
/score/mesh/translate/xyz 0 -11.6 0 cm
/score/mesh/nBin 15 50 50

/score/quantity/doseDeposit dose

#
/score/close
#
/score/list
#
#/vis/disable
#
/control/execute run1.mac                                           
#
# Dump scores to a file
#

/score/dumpQuantityToFile boxMesh_1 dose dose1-SoftTissue.txt
/score/dumpQuantityToFile boxMesh_2 dose dose2-SoftTissue.txt
/score/dumpQuantityToFile boxMesh_3 dose dose3-SoftTissue.txt
/score/dumpQuantityToFile boxMesh_4 dose dose4-SoftTissue.txt

#
########################################
#
# drawing projections
#
/score/drawProjection boxMesh_1 dose
/score/drawProjection boxMesh_2 dose
/score/drawProjection boxMesh_3 dose
/score/drawProjection boxMesh_4 dose