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/// \file B1RunAction.cc
/// \brief Implementation of the B1RunAction class

#include "B1RunAction.hh"
#include "B1PrimaryGeneratorAction.hh"
#include "B1DetectorConstruction.hh"
// #include "B1Run.hh"

#include "G4RunManager.hh"
#include "G4Run.hh"
#include "G4AccumulableManager.hh"
#include "G4LogicalVolumeStore.hh"
#include "G4LogicalVolume.hh"
#include "G4UnitsTable.hh"
#include "G4SystemOfUnits.hh"
#include "g4analysis.hh"

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B1RunAction::B1RunAction()
: G4UserRunAction(),
  fEdep(0.),
  fEdep2(0.)
{ 
  // add new units for dose
  // 
  const G4double milligray = 1.e-3*gray;
  const G4double microgray = 1.e-6*gray;
  const G4double nanogray  = 1.e-9*gray;  
  const G4double picogray  = 1.e-12*gray;
   
  new G4UnitDefinition("milligray", "milliGy" , "Dose", milligray);
  new G4UnitDefinition("microgray", "microGy" , "Dose", microgray);
  new G4UnitDefinition("nanogray" , "nanoGy"  , "Dose", nanogray);
  new G4UnitDefinition("picogray" , "picoGy"  , "Dose", picogray); 

  // Register accumulable to the accumulable manager
  G4AccumulableManager* accumulableManager = G4AccumulableManager::Instance();
  accumulableManager->RegisterAccumulable(fEdep);
  accumulableManager->RegisterAccumulable(fEdep2); 
 
  //-----------START CREATE ROOT FILE-------------------------------//
  auto analysisManager = G4Analysis::ManagerInstance("root");
  G4cout << "Using " << analysisManager->GetType() << G4endl;

  // Default settings
  analysisManager->SetNtupleMerging(true);
     // Note: merging ntuples is available only with Root output
  analysisManager->SetVerboseLevel(1);
  analysisManager->SetFileName("B1");
  //------------END CREATE ROOT FILE------------------------------//
  //-----------START CREATE NMTUPLE-------------------------------//
  
  // Creating ntuple
  //ntupla id=0
  analysisManager->CreateNtuple("B1Volume1", "Volume 1");
  analysisManager->CreateNtupleDColumn("ParticleID");
  analysisManager->CreateNtupleDColumn("kinEnergy");
  analysisManager->CreateNtupleDColumn("MomentumDirection.x");
  analysisManager->CreateNtupleDColumn("MomentumDirection.y");
  analysisManager->CreateNtupleDColumn("MomentumDirection.z");
  analysisManager->CreateNtupleDColumn("PositionDirection.x");
  analysisManager->CreateNtupleDColumn("PositionDirection.y");
  analysisManager->CreateNtupleDColumn("PositionDirection.z");
  analysisManager->CreateNtupleDColumn("ReleasedEnergy");
  analysisManager->FinishNtuple();
 
  //ntupla id=1
  analysisManager->CreateNtuple("B1Volume2", "Volume 2");
  analysisManager->CreateNtupleDColumn("ParticleID");
  analysisManager->CreateNtupleDColumn("kinEnergy");
  analysisManager->CreateNtupleDColumn("MomentumDirection.x");
  analysisManager->CreateNtupleDColumn("MomentumDirection.y");
  analysisManager->CreateNtupleDColumn("MomentumDirection.z");
  analysisManager->CreateNtupleDColumn("PositionDirection.x");
  analysisManager->CreateNtupleDColumn("PositionDirection.y");
  analysisManager->CreateNtupleDColumn("PositionDirection.z");
  analysisManager->CreateNtupleDColumn("ReleasedEnergy");
  analysisManager->FinishNtuple();
  
  //ntupla id=2
  analysisManager->CreateNtuple("B1EventVariables", "Events");
  analysisManager->CreateNtupleDColumn("ReleasedEnergy");
  analysisManager->CreateNtupleDColumn("ReleasedEnergy2");
  analysisManager->FinishNtuple();
  
  //ntupla id=3
  analysisManager->CreateNtuple("B1Secondaryparticles", "Events");
  analysisManager->CreateNtupleDColumn("SecondaryParticleID");
  analysisManager->CreateNtupleDColumn("SecondaryParticleKinEn");
  analysisManager->CreateNtupleDColumn("SecondaryParticleMomDir.x");
  analysisManager->CreateNtupleDColumn("SecondaryParticleMomDir.y");
  analysisManager->CreateNtupleDColumn("SecondaryParticleMomDir.z");
  analysisManager->FinishNtuple();
  //-----------END CREATE NMTUPLE-------------------------------//
}

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B1RunAction::~B1RunAction()
{}

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void B1RunAction::BeginOfRunAction(const G4Run*)
{ 
  // inform the runManager to save random number seed
  G4RunManager::GetRunManager()->SetRandomNumberStore(false);

  // reset accumulables to their initial values
  G4AccumulableManager* accumulableManager = G4AccumulableManager::Instance();
  accumulableManager->Reset();
  
  //---------------START OPENING ROOT FILE TO WRITE IN--------------//
  //inform the runManager to save random number seed
  //G4RunManager::GetRunManager()->SetRandomNumberStore(true);
  
  // Get analysis manager
  auto analysisManager = G4AnalysisManager::Instance();

  // Open an output file 
  // The default file name is set in B5RunAction::B5RunAction(),
  // it can be overwritten in a macro
  analysisManager->OpenFile();
  //---------------START OPENING ROOT FILE TO WRITE IN--------------//

}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

void B1RunAction::EndOfRunAction(const G4Run* run)
{
	/*
  G4int nofEvents = run->GetNumberOfEvent();
  if (nofEvents == 0) return;

  // Merge accumulables 
  G4AccumulableManager* accumulableManager = G4AccumulableManager::Instance();
  accumulableManager->Merge();

  // Compute dose = total energy deposit in a run and its variance
  //
  G4double edep  = fEdep.GetValue();
  G4double edep2 = fEdep2.GetValue();
  
  G4double rms = edep2 - edep*edep/nofEvents;
  if (rms > 0.) rms = std::sqrt(rms); else rms = 0.;  

  const B1DetectorConstruction* detectorConstruction
   = static_cast<const B1DetectorConstruction*>
     (G4RunManager::GetRunManager()->GetUserDetectorConstruction());
  G4double mass = detectorConstruction->GetScoringVolume()->GetMass();
  G4double dose = edep/mass;
  G4double rmsDose = rms/mass;

  // Run conditions
  //  note: There is no primary generator action object for "master"
  //        run manager for multi-threaded mode.
  const B1PrimaryGeneratorAction* generatorAction
   = static_cast<const B1PrimaryGeneratorAction*>
     (G4RunManager::GetRunManager()->GetUserPrimaryGeneratorAction());
  G4String runCondition;
  if (generatorAction)
  {
    const G4ParticleGun* particleGun = generatorAction->GetParticleGun();
    runCondition += particleGun->GetParticleDefinition()->GetParticleName();
    runCondition += " of ";
    G4double particleEnergy = particleGun->GetParticleEnergy();
    runCondition += G4BestUnit(particleEnergy,"Energy");
  }
        
  // Print
  //  
  if (IsMaster()) {
    G4cout
     << G4endl
     << "--------------------End of Global Run-----------------------";
  }
  else {
    G4cout
     << G4endl
     << "--------------------End of Local Run------------------------";
  }
  
  G4cout
     << G4endl
     << " The run consists of " << nofEvents << " "<< runCondition
     << G4endl
     << " Cumulated dose per run, in scoring volume : " 
     << G4BestUnit(dose,"Dose") << " rms = " << G4BestUnit(rmsDose,"Dose")
     << G4endl
     << "------------------------------------------------------------"
     << G4endl
     << G4endl;
     */
     //----------------START WRITING AND SAVING ROOT FILE-----------//////
     // save histograms & ntuple
  //
  auto analysisManager = G4AnalysisManager::Instance();
  analysisManager->Write();
  analysisManager->CloseFile();
  //----------------END WRITING AND SAVING ROOT FILE-----------//////
  
}

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void B1RunAction::AddEdep(G4double edep)
{
  fEdep  += edep;
  fEdep2 += edep*edep;
  
  
}

/////////////------------------START ADD ADDEDEP2-----------/////////
void B1RunAction::AddEdep2(G4double edep)
{
  fEdep  += edep;
  

}

/////////////------------------END ADD ADDEDEP2-----------/////////

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