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//
/// \file electromagnetic/TestEm18/src/PhysicsList.cc
/// \brief Implementation of the PhysicsList class
//
//
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

#include "PhysicsList.h"
//#include "PhysicsListMessenger.h"

//#include "PhysicsList.hh"
#include "G4SystemOfUnits.hh"
#include "G4Gamma.hh"
#include "G4OpticalPhoton.hh"
// leptons
#include "G4Electron.hh"
#include "G4Positron.hh"

// Baryons
#include "G4Proton.hh"
#include "G4AntiProton.hh"

// Nuclei

#include "G4GenericIon.hh"

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

PhysicsList::PhysicsList():  G4VUserPhysicsList()
{
  defaultCutValue = 1.*micrometer;
  cutForGamma     = defaultCutValue;
  cutForElectron  = defaultCutValue;
  cutForPositron  = defaultCutValue;
  cutForProton    = defaultCutValue;
  
  SetVerboseLevel(1);
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

PhysicsList::~PhysicsList()
{}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::ConstructParticle()
{
  ConstructBosons();
  ConstructLeptons();
  ConstructBarions();
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::ConstructBosons()
{ 
  // gamma
  G4Gamma::GammaDefinition();

  // optical photon
  G4OpticalPhoton::OpticalPhotonDefinition();
}
 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::ConstructLeptons()
{
  // leptons
  G4Electron::ElectronDefinition();
  G4Positron::PositronDefinition();
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::ConstructBarions()
{
  //  barions
  G4Proton::ProtonDefinition();
  G4AntiProton::AntiProtonDefinition();
  G4GenericIon::GenericIonDefinition();
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::ConstructProcess()
{
  AddTransportation();
  ConstructEM();
  ConstructGeneral();
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

#include "G4PhotoElectricEffect.hh"
#include "G4ComptonScattering.hh"
#include "G4GammaConversion.hh"

#include "G4eMultipleScattering.hh"
#include "G4eIonisation.hh"
#include "G4eBremsstrahlung.hh"
#include "G4eplusAnnihilation.hh"

#include "G4MuMultipleScattering.hh"
#include "G4WentzelVIModel.hh"

#include "G4UAtomicDeexcitation.hh"
#include "G4MuIonisation.hh"
#include "G4MuBremsstrahlung.hh"
#include "G4MuPairProduction.hh"
#include "G4CoulombScattering.hh"

#include "G4hMultipleScattering.hh"
#include "G4ionIonisation.hh"
#include "G4hIonisation.hh"
#include "G4hBremsstrahlung.hh"
#include "G4hPairProduction.hh"

#include "G4StepLimiter.hh"

#include "G4LossTableManager.hh"

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::ConstructEM()
{

  G4PhysicsListHelper* ph = G4PhysicsListHelper::GetPhysicsListHelper();

// ****************************************************************
// Identical to G4EmStandardPhysics but added G4StepLimiter process
// ****************************************************************


  auto particleIterator=GetParticleIterator();
  particleIterator->reset();

  while( (*particleIterator)() ){

    G4ParticleDefinition* particle = particleIterator->value();

    G4String particleName = particle->GetParticleName();

    if (particleName == "gamma") {

      ph->RegisterProcess(new G4PhotoElectricEffect(), particle);
      ph->RegisterProcess(new G4ComptonScattering(), particle);
      ph->RegisterProcess(new G4GammaConversion(), particle);

    } else if (particleName == "e-") {

      ph->RegisterProcess(new G4eMultipleScattering(), particle);
      ph->RegisterProcess(new G4eIonisation(), particle);
      ph->RegisterProcess(new G4eBremsstrahlung(), particle);

    } else if (particleName == "e+") {

      ph->RegisterProcess(new G4eMultipleScattering(), particle);
      ph->RegisterProcess(new G4eIonisation(), particle);
      ph->RegisterProcess(new G4eBremsstrahlung(), particle);
      ph->RegisterProcess(new G4eplusAnnihilation(), particle);
      
    } else if( particleName == "mu+" || 
               particleName == "mu-"    ) {

      G4MuMultipleScattering* msc = new G4MuMultipleScattering();
      msc->AddEmModel(0, new G4WentzelVIModel());

      ph->RegisterProcess(msc, particle);
      ph->RegisterProcess(new G4MuIonisation(), particle);
      ph->RegisterProcess(new G4MuBremsstrahlung(), particle);
      ph->RegisterProcess(new G4MuPairProduction(), particle);
      ph->RegisterProcess(new G4CoulombScattering(), particle);

    } else if (particleName == "alpha" ||
               particleName == "He3") {

      ph->RegisterProcess(new G4hMultipleScattering(), particle);
      ph->RegisterProcess(new G4ionIonisation(), particle);

    } else if (particleName == "GenericIon") {

      ph->RegisterProcess(new G4hMultipleScattering(), particle);
      ph->RegisterProcess(new G4ionIonisation(), particle);
     
    } else if (particleName == "proton") {
      ph->RegisterProcess(new G4hMultipleScattering(), particle);
      ph->RegisterProcess(new G4hIonisation(), particle);
      ph->RegisterProcess(new G4hBremsstrahlung(), particle);
      ph->RegisterProcess(new G4hPairProduction(), particle);

      ph->RegisterProcess(new G4StepLimiter(), particle);
            
    }
  }
  //===========================================================================//
  // la deséxcitation des atomes:: pour avoir les rayonnements caractéris-
  //                tiques dans le spectre des rayons x
  //===========================================================================//
    G4VAtomDeexcitation* de = new G4UAtomicDeexcitation();
    de->SetFluo(true);
    de->SetAuger(true);
    de->SetPIXE(true);
    G4LossTableManager::Instance()->SetAtomDeexcitation(de);
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::ConstructGeneral()
{ }

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::SetCuts()
{
  if (verboseLevel >0){
    G4cout << "PhysicsList::SetCuts:";
    G4cout << "CutLength : " << G4BestUnit(defaultCutValue,"Length") << G4endl;
  }  
  
  SetCutValue(cutForGamma, "gamma");
  SetCutValue(cutForElectron, "e-");
  SetCutValue(cutForPositron, "e+");
  SetCutValue(cutForProton, "proton");
  SetCutValue(cutForProton, "anti_proton");
  
  if (verboseLevel>0) DumpCutValuesTable();
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::SetCutForGamma(G4double cut)
{
 cutForGamma=cut; 
}
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::SetCutForElectron(G4double cut)
{
  cutForElectron = cut;
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::SetCutForPositron(G4double cut)
{
  cutForPositron = cut;
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....

void PhysicsList::SetCutForProton(G4double cut)
{
  cutForProton = cut;
}


/*
#include "PhysicsListMessenger.h"

#include "PhysListEmStandard.h"
#include "PhysListEmLivermore.h"
#include "PhysListEmPenelope.h"

#include "G4LossTableManager.hh"
#include "G4UnitsTable.hh"
#include "G4SystemOfUnits.hh"


#include "G4EmParameters.hh"

////////////////

#include "G4EmStandardPhysics.hh"
#include "G4EmStandardPhysics_option1.hh"
#include "G4EmStandardPhysics_option2.hh"
#include "G4EmStandardPhysics_option3.hh"
#include "G4EmStandardPhysics_option4.hh"

#include "G4EmLivermorePhysics.hh"
#include "G4EmPenelopePhysics.hh"


#include "G4Decay.hh"
//#include "XrayFluoStepMax.hh"
#include "G4PhotoElectricEffect.hh"
#include "G4ComptonScattering.hh"
#include "G4GammaConversion.hh"
#include "G4RayleighScattering.hh"

#include "G4eIonisation.hh"
#include "G4eBremsstrahlung.hh"

#include "G4eMultipleScattering.hh"
#include "G4hMultipleScattering.hh"

#include "G4eIonisation.hh"
#include "G4eBremsstrahlung.hh"
#include "G4eplusAnnihilation.hh"
#include "G4hIonisation.hh"
#include "G4ionIonisation.hh"
//////////////////

#include "G4ParticleDefinition.hh"
#include "G4ProcessManager.hh"

//////////////////
#include "G4HadronPhysicsQGSP_BERT.hh"
#include "G4HadronPhysicsQGSP_BIC.hh"
#include "G4HadronPhysicsQGSP_BIC_HP.hh"
//#include "G4HadronPhysicsQGSP_FTFP_BERT.hh"
//#include "G4HadronPhysicsLHEP_BERT_HP.hh"
//#include "G4HadronPhysicsLHEP_BIC.hh"
//#include "G4HadronPhysicsLHEP_BIC_HP.hh"
#include "G4LivermorePhotoElectricModel.hh"
#include "G4LivermoreRayleighModel.hh"
#include "G4LivermorePolarizedRayleighModel.hh"
//#include "G4LivermorePolarizedPhotoElectricModel.hh"
#include "G4LivermoreComptonModel.hh"
#include "G4LivermorePolarizedComptonModel.hh"
#include "G4LivermoreGammaConversionModel.hh"
#include "G4LivermorePolarizedGammaConversionModel.hh"
#include "G4LivermoreIonisationModel.hh"
#include "G4LivermoreBremsstrahlungModel.hh"
#include "G4OpRayleigh.hh"
#include "G4RayleighScattering.hh"
#include "G4RayleighAngularGenerator.hh"
#include "G4XrayRayleighModel.hh"
#include "G4PenelopeRayleighModel.hh"
#include "G4PenelopeRayleighModelMI.hh"
#include "G4LivermoreRayleighModel.hh"
#include "G4LivermorePolarizedRayleighModel.hh"
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

PhysicsList::PhysicsList() : G4VModularPhysicsList(),
  fMessenger(0), 
  fEmPhysicsList(0)
{
  //G4LossTableManager::Instance();
  //fMessenger = new PhysicsListMessenger(this); 
   
  // EM physics
  //fEmName = G4String("standard");
  //fEmPhysicsList = new PhysListEmStandard(fEmName);
    
 // SetDefaultCutValue(1.*mm);
    
  //SetVerboseLevel(1);
  
   G4LossTableManager::Instance()->SetVerbose(1);
      
  defaultCutValue = 100.*um;

  cutForGamma     = defaultCutValue;
  cutForElectron  = defaultCutValue;
  cutForPositron  = defaultCutValue;
  cutForProton    = defaultCutValue;
 
  // set cut values for gamma at first and for e- second and next for e+,
  // because some processes for e+/e- need cut values for gamma
  SetCutValue(cutForGamma, "gamma");
  SetCutValue(cutForElectron, "e-");
  SetCutValue(cutForPositron, "e+");

  DumpCutValuesTable();
  SetVerboseLevel(1);

  // EM physics
  fEmName = G4String("emlivermore");
  fEmPhysicsList = new G4EmLivermorePhysics;
  
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

PhysicsList::~PhysicsList()
{
  delete fEmPhysicsList;
  delete fMessenger;  
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

void PhysicsList::AddPhysicsList(const G4String& name)
{
  
  if (verboseLevel>1) {
    G4cout << "PhysicsList::AddPhysicsList: <" << name << ">" << G4endl;
  }

  if (name == fEmName) return;

  if (name == "standard") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new PhysListEmStandard(name);
        
  } else if (name == "livermore") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new PhysListEmLivermore(name);
    
  } else if (name == "penelope") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new PhysListEmPenelope(name);

  } else {

    G4cout << "PhysicsList::AddPhysicsList: <" << name << ">"
           << " is not defined"
           << G4endl;
  }
  
 if (verboseLevel>-1) {
    G4cout << "PhysicsList::AddPhysicsList: <" << name << ">" << G4endl;
  }

  if (name == fEmName) return;

  if (name == "livermore") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new PhysListEmLivermore(name);

  } else if (name == "standard") {
    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new PhysListEmStandard(name); 

  } else if (name == "emstandard_opt1") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new G4EmStandardPhysics_option1();

  } else if (name == "emstandard_opt2") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new G4EmStandardPhysics_option2();

  } else if (name == "emstandard_opt3") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new G4EmStandardPhysics_option3();
    
  }  else if (name == "emstandard_opt4") {

    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new G4EmStandardPhysics_option4();
    
  } else if (name == "penelope"){
    fEmName = name;
    delete fEmPhysicsList;
    fEmPhysicsList = new PhysListEmPenelope(name);

  } else {

    G4cout << "PhysicsList::AddPhysicsList: <" << name << ">"
           << " is not defined"
           << G4endl;
  }
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

// Bosons
#include "G4ChargedGeantino.hh"
#include "G4Geantino.hh"
#include "G4Gamma.hh"
#include "G4OpticalPhoton.hh"
// leptons
#include "G4Electron.hh"
#include "G4Positron.hh"
#include "G4MuonPlus.hh"
#include "G4MuonMinus.hh"
#include "G4NeutrinoMu.hh"
#include "G4AntiNeutrinoMu.hh"
#include "G4NeutrinoE.hh"
#include "G4AntiNeutrinoE.hh"

// Mesons
#include "G4PionPlus.hh"
#include "G4PionMinus.hh"
#include "G4KaonPlus.hh"
#include "G4KaonMinus.hh"

// Baryons
#include "G4Proton.hh"
#include "G4AntiProton.hh"
#include "G4Neutron.hh"
#include "G4AntiNeutron.hh"

// Nuclei
#include "G4Deuteron.hh"
#include "G4Triton.hh"
#include "G4Alpha.hh"
#include "G4GenericIon.hh"

// Hadrons
#include "G4Proton.hh"
#include "G4MesonConstructor.hh"
#include "G4BaryonConstructor.hh"
#include "G4IonConstructor.hh"

void PhysicsList::ConstructParticle()
{
// pseudo-particles
  G4Geantino::GeantinoDefinition();
  G4ChargedGeantino::ChargedGeantinoDefinition();
  
  // gamma
  G4Gamma::GammaDefinition();
  
  // leptons
  G4Electron::ElectronDefinition();
  G4Positron::PositronDefinition();
  G4MuonPlus::MuonPlusDefinition();
  G4MuonMinus::MuonMinusDefinition();

  G4NeutrinoE::NeutrinoEDefinition();
  G4AntiNeutrinoE::AntiNeutrinoEDefinition();
  G4NeutrinoMu::NeutrinoMuDefinition();
  G4AntiNeutrinoMu::AntiNeutrinoMuDefinition();  

  // mesons
  G4MesonConstructor mConstructor;
  mConstructor.ConstructParticle();

  // barions
  G4BaryonConstructor bConstructor;
  bConstructor.ConstructParticle();

  // ions
  G4IonConstructor iConstructor;
  iConstructor.ConstructParticle();
  
  
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

void PhysicsList::ConstructProcess()
{
  AddTransportation();
  fEmPhysicsList->ConstructProcess();
  AddDecay();  
 // AddStepMax();

  // Em options
  //
  G4EmParameters* param = G4EmParameters::Instance();
  param->SetFluo(true);
  param->SetAuger(true);
  param->SetPixe(true);
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
void PhysicsList::AddDecay()
{
  // Add Decay Process

  G4Decay* fDecayProcess = new G4Decay();

  auto particleIterator=GetParticleIterator();
  particleIterator->reset();
  while( (*particleIterator)() ){
    G4ParticleDefinition* particle = particleIterator->value();
    G4ProcessManager* pmanager = particle->GetProcessManager();

    if (fDecayProcess->IsApplicable(*particle) && !particle->IsShortLived()) { 

      pmanager ->AddProcess(fDecayProcess);

      // set ordering for PostStepDoIt and AtRestDoIt
      pmanager ->SetProcessOrdering(fDecayProcess, idxPostStep);
      pmanager ->SetProcessOrdering(fDecayProcess, idxAtRest);

    }
  }
}
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

#include "G4ProcessManager.hh"
#include "StepMax.h"

void PhysicsList::AddStepMax()
{
  // Step limitation seen as a process
  StepMax* stepMaxProcess = new StepMax();

  auto particleIterator=GetParticleIterator();
  particleIterator->reset();
  while ((*particleIterator)()){
      G4ParticleDefinition* particle = particleIterator->value();
      G4ProcessManager* pmanager = particle->GetProcessManager();

      if (stepMaxProcess->IsApplicable(*particle) && !particle->IsShortLived())
        {
          pmanager ->AddDiscreteProcess(stepMaxProcess);
        }
  }
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

void PhysicsList::SetCutForGamma(G4double cut)
{
  cutForGamma = cut;
  SetParticleCuts(cutForGamma, G4Gamma::Gamma());
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

void PhysicsList::SetCutForElectron(G4double cut)
{
  cutForElectron = cut;
  SetParticleCuts(cutForElectron, G4Electron::Electron());
}


//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

void PhysicsList::SetCutForPositron(G4double cut)
{
  cutForPositron = cut;
  SetParticleCuts(cutForPositron, G4Positron::Positron());
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

void PhysicsList::SetCutForProton(G4double cut)
{
  cutForProton = cut;
  SetParticleCuts(cutForProton, G4Proton::Proton());
}
*/